CDS

Accession Number TCMCG079C11154
gbkey CDS
Protein Id XP_017422097.1
Location join(623503..623838,623925..624016,624241..624326,624408..624544,625113..625187,625512..625603,625992..626063,626252..626331,626853..626890,626970..626976,627130..627285,629051..629126,630665..630789,630878..630912,631010..631068,632889..632972,633132..633227,633325..633373,633486..633573,633661..633864,634278..634403,634527..634626,634713..634818,635186..635316,635447..635608,636940..637095,638239..638977)
Gene LOC108331720
GeneID 108331720
Organism Vigna angularis

Protein

Length 1168aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA328963
db_source XM_017566608.1
Definition PREDICTED: DNA ligase 4 isoform X1 [Vigna angularis]

EGGNOG-MAPPER Annotation

COG_category L
Description DNA ligase
KEGG_TC -
KEGG_Module -
KEGG_Reaction R00381        [VIEW IN KEGG]
KEGG_rclass RC00005        [VIEW IN KEGG]
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03400        [VIEW IN KEGG]
KEGG_ko ko:K10777        [VIEW IN KEGG]
EC 6.5.1.1        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko03450        [VIEW IN KEGG]
map03450        [VIEW IN KEGG]
GOs GO:0000726        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0003909        [VIEW IN EMBL-EBI]
GO:0003910        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005576        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005911        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006259        [VIEW IN EMBL-EBI]
GO:0006266        [VIEW IN EMBL-EBI]
GO:0006281        [VIEW IN EMBL-EBI]
GO:0006289        [VIEW IN EMBL-EBI]
GO:0006297        [VIEW IN EMBL-EBI]
GO:0006302        [VIEW IN EMBL-EBI]
GO:0006303        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006974        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009314        [VIEW IN EMBL-EBI]
GO:0009506        [VIEW IN EMBL-EBI]
GO:0009628        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010165        [VIEW IN EMBL-EBI]
GO:0010212        [VIEW IN EMBL-EBI]
GO:0016874        [VIEW IN EMBL-EBI]
GO:0016886        [VIEW IN EMBL-EBI]
GO:0030054        [VIEW IN EMBL-EBI]
GO:0032807        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0033554        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048046        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051103        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0055044        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0140097        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCGACGGAGCAAACCAAATTCAGCGTGTTGTGCAGCCTCTTCACGTGGACGCAGCGGAGCAAGTCGGCGGCGAAGAAGCGCTCCAAGTTCCGCAAGTTCCTCGACGCCTTCTGCATTGACCGCAACTTCTTCCCCGCTATTCGCCTCATTCTCCCCAACCTCGATCGCGAGCGCGGCTCCTATGGCCTCAAGGAGTCCGTTCTCGCCACCTCCCTCATCGACGCCCTCGGCATCTCCCGTGACTCCCCCGATGCCCTCCGACTCATCAATTGGCGTAAGGGTGGCGCCGCCACCGGCGCTACAGCAGGAAATTTCGCCCTCGTCGCCACCGAGGTGCTGCACCGCAGGCAAGGGACCGCTTCAGGAGGGTTGACGATAAGGGAGTTGAATGAGTTGCTTGACCGGTTGGCTTCCGGTGAAAACAGGGCTGAGAAAATTTTGGTTCTTTCTACCCTTATCCAAAAGACAAATGCACAGGAAATGAAGTGGATTATCATGATAATCCTGAAAGATCTAAAGCTGGGAATTAGTGAAAAAAGCATTTTTCATGAGTTCCATCCTGATGCAGAAGACTTGTTTAATGTTACCTGTGACTTAAAACTAGTATGTGAAAAGCTAAGGGATCGGAATCAGCGGCATAAACGGCAGGATATTGAAGTTGGGAAAGCTGTCCGCCCCCAATTAGCTAAGAGAGTTGCTAATGCAACTGAAGCATGGAAGAAGCTTCATGGGAAGGAAGTGGTTGTTGAGTGCAAATTTGATGGCGACCGAATTCAAATTCATAAAAACGGAACTGAGATACATTTTTTCTCAAGGAACTTTATAGATCATTCTGAATATGCACATGCAATGTCAGATATCATAATACAAAACATTCTTGTAGATAGGTGTATCCTTGATGGTGAAATGTTGGTGTGGGACAAATCCTCAAAACGCTTTGCTGAGTTTGGCTCAAATCAGGAAATAGCCAAGGCAGCAAGAGATGGACTTGATAGTGACAGACAGTTATGCTATGTTGCGTTTGATATCCTTTATTTTGGAGATACTAGTGTGATTCACCAATCTTTGAAGGAAAGACATGAGATTTTATGTAAAGTTGTTAGGCCAATGAAGGGACGGTTGGAAGTTTTGGTGCCTAATGCTGGTATCAACAGTCATCTTACTTCAGGTGAACCTTGTTGGTCATTTATTGCTCATAAAGTTGATGAAGTTGAGAGGTTTTTCAAGGAAACCATTGAAAATAGAGATGAGGGAATTGTTTTAAAAGACCACAGCTCTAAATGGGAACCTAGTGATCGTAGTGGAAAGTGGCTAAAATTGAAGCCTGAATACATTCAAGCTGGCTCTGATTTGGATGTACTTATCATAGGTGGCTACTATGGTTCTGGACGACGCGGAGGACAGGTTGCTCAATTCTTGGTTGGCCTTGCAGAACGTCAATCACCAAATGCACAACCTATGCGGTTTATATCCTTTTGCAGAGTTGGCACTGGACTCTCTGATGAGGAGCTTGATGTTGTAATAACCAAATTAAAACCATACTTCAGAAAGTATGAATATCCAAAGAAGAGGCCACCAAGTTTTTATCAAGTAACTAATCATTCAAAAGAAAGACCTGATGTGTGGGTTGATAGCCCTGAGAAATCAATTATTCTGTCTATTACCAGTGATATCCGAACTATAGAATCTGAGGTATTTGCTGCACCTTACAGCCTGAGATTTCCTAGGATTGACAGGGTGAGATATGACAAAGCTTGGAACGAATGCCTTGATGTTCAATCATTTATAGAACTAGTGCATTCTAGCAATGGTACCACACAGAGGGATACAGAATATGGCAGCAAACAGGACAGTAAACCAAAAAGAATGAAATCCTCCACTAGGGGAGAAAAGAAAAACATGTCCATCGTTCCTTCTCATTTAATTCAAACTGATATTTCCAGCATTAAGGGGGGCTCCTTAATATTGTCAAATATGATGTTCTACTTTGCTAATGTGCCTTCATCGCATTCTCTTGAGTCCTTGCACAAAATAGTTGCTGAGAATGGGGGAACTTTTTCAATGAATTTGAACAACTCAGTCACACATTGTGTTGCCGCAGACAGCAAGGGCTTTAAATTTGAAGCAGCAAAGCGTCATGGTGATATCATTCATTATTCTTGGGTACTAGACTGTTATGAGCAAAAAAAGCTTGTCTGCTTACAGCCCAAGTACTTCCTTTTCCTATCTGAACTGACAAAGAAGAAGTTCCGAGAAGAAATTGATGAGTTCTCAGACTCTTTCTACATGGACCTAGATCTTGGAGACATCAAGCAGCTCTTAAGCAATATTAGTAAGTCTGAAGATGTCAGCACTGTCGATCATTACAGGAAAAAATACTGCCCAAAGGATAAGTGGTCTTTCTTTTGTGGATGTTCAATTTATTTCCACACTGCAACACCTTCATCGAAAGGAGATTGGCATTATATATTACAACTTGCTTTGAGGAGATTCAAGCTTGAGGTTCTCATGGGTGGTGGAAAAGTTACCTCTAATCTTACTTCTGCAACCCATTTAGTGGCCTTTCTTGTGCCAGGATGTCTGACTGACTTTGAACAAATACTGAGTAGTTTCACTTCAGTAGAAAGGAAAATTCTCCGAAGCAAGAGGTTGTATATAGTTAATTCCCAGTGGTTGGAAGATTGTTCAGACAGTAGCCAAAGATTACCAGAAGACTCTTACAGTTTGAAGCCCTGGGGAATAGAAGAGACAACTGCTGAAGATTGTGGACTGGACTTGGCGTTAGAGGCTCATCAGTGTGGAGATAACACACAACACCAAAATACATCTTTCTCTGACAAGGGAAATCGGAAAAGAAGTGAACAAGTTGCATGCGAAGACAGTATGGCCTTCTTATCCCGAGAGAAGGGTATCAAAAGGAAAAGAGGAAGACCTGTGGGCAGTGGCATAAAAAATGTAAAACCAACTGGCAAACAAACTCGAAGAGCACGACCACAAAATGTGAAAAAGCCTACTAAAATATGGGAATACGAATCATCGGATGAAAGCGATTCTCGTGACAAGCAGGAGATTGACACCAGAGCAGGAAGTCTTAACTTTTATAAGAAACATTCAGAACCCCAGGAGAATGAGGAACGGGAAAATGTCCAAGTTTCTAGGACAGTGGAAAGTTCTGAACAAAATAAGGTAGACAACAAGCTGGAGGACTTGAAGGACAATGATCATGAAAGAATGTTGATTCCTGAAATAGAAATGACTGATAGGTACAATGACCAAAAGAATGAGGTGGTAGAGAAATTAGACTTTTCTGCTGACCCCCTTCAGGCGATGTTATTTGACATGATTCCTACTCTTGGCACCCAAAAAGTTGAGCAACCTATGAATCTTAGTGTTAGAGAAGAGAAACTAGCAGAAACCTCCAATGCAGAAACAGAGCCTATAACTACAAAGAAAAACAAGGTTAGCTTCATGGATGCTGCCAATGAGCTGCTGAAGGACTGGTAG
Protein:  
MATEQTKFSVLCSLFTWTQRSKSAAKKRSKFRKFLDAFCIDRNFFPAIRLILPNLDRERGSYGLKESVLATSLIDALGISRDSPDALRLINWRKGGAATGATAGNFALVATEVLHRRQGTASGGLTIRELNELLDRLASGENRAEKILVLSTLIQKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLRDRNQRHKRQDIEVGKAVRPQLAKRVANATEAWKKLHGKEVVVECKFDGDRIQIHKNGTEIHFFSRNFIDHSEYAHAMSDIIIQNILVDRCILDGEMLVWDKSSKRFAEFGSNQEIAKAARDGLDSDRQLCYVAFDILYFGDTSVIHQSLKERHEILCKVVRPMKGRLEVLVPNAGINSHLTSGEPCWSFIAHKVDEVERFFKETIENRDEGIVLKDHSSKWEPSDRSGKWLKLKPEYIQAGSDLDVLIIGGYYGSGRRGGQVAQFLVGLAERQSPNAQPMRFISFCRVGTGLSDEELDVVITKLKPYFRKYEYPKKRPPSFYQVTNHSKERPDVWVDSPEKSIILSITSDIRTIESEVFAAPYSLRFPRIDRVRYDKAWNECLDVQSFIELVHSSNGTTQRDTEYGSKQDSKPKRMKSSTRGEKKNMSIVPSHLIQTDISSIKGGSLILSNMMFYFANVPSSHSLESLHKIVAENGGTFSMNLNNSVTHCVAADSKGFKFEAAKRHGDIIHYSWVLDCYEQKKLVCLQPKYFLFLSELTKKKFREEIDEFSDSFYMDLDLGDIKQLLSNISKSEDVSTVDHYRKKYCPKDKWSFFCGCSIYFHTATPSSKGDWHYILQLALRRFKLEVLMGGGKVTSNLTSATHLVAFLVPGCLTDFEQILSSFTSVERKILRSKRLYIVNSQWLEDCSDSSQRLPEDSYSLKPWGIEETTAEDCGLDLALEAHQCGDNTQHQNTSFSDKGNRKRSEQVACEDSMAFLSREKGIKRKRGRPVGSGIKNVKPTGKQTRRARPQNVKKPTKIWEYESSDESDSRDKQEIDTRAGSLNFYKKHSEPQENEERENVQVSRTVESSEQNKVDNKLEDLKDNDHERMLIPEIEMTDRYNDQKNEVVEKLDFSADPLQAMLFDMIPTLGTQKVEQPMNLSVREEKLAETSNAETEPITTKKNKVSFMDAANELLKDW